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1

Post-transcriptional labeling by using Suzuki–Miyaura cross-coupling generates functional RNA probes

Walunj, Manisha B, Tanpure, Arun A, Srivatsan, Seergazhi G

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 2.58 MB

english, 2018

2

Vinyluridine as a Versatile Chemoselective Handle for the Post-transcriptional Chemical Functionalization of RNA

George, Jerrin Thomas, Srivatsan, Seergazhi G.

Journal:

Bioconjugate Chemistry

Year:

2017

Language:

english

File:

PDF, 1011 KB

english, 2017

3

Structure of the Ribosomal RNA Decoding Site Containing a Selenium-Modified Responsive Fluorescent Ribonucleoside Probe

Nuthanakanti, Ashok, Boerneke, Mark A., Hermann, Thomas, Srivatsan, Seergazhi G.

Journal:

Angewandte Chemie International Edition

Year:

2017

Language:

english

File:

PDF, 2.26 MB

english, 2017

4

Probing Human Telomeric DNA and RNA Topology and Ligand-Binding in a Cellular Model Using Responsive Fluorescent Nucleoside Probes

Srivatsan, Seergazhi G, Manna, Sudeshna, Panse, Cornelia H, Sontakke, Vyankat A, Sangamesh, Sarangamath

Journal:

Year:

2017

Language:

english

File:

PDF, 2.30 MB

english, 2017

5

Terminal Uridylyl Transferase Mediated Site-Directed Access to Clickable Chromatin Employing CRISPR-dCas9

George, Jerrin Thomas, Azhar, Mohd., Aich, Meghali, Sinha, Dipanjali, Ambi, Uddhav B, Maiti, Souvik, CHAKRABORTY, DEBOJYOTI, Srivatsan, Seergazhi G

Journal:

Journal of the American Chemical Society

Year:

2020

File:

PDF, 1.67 MB

2020

6

Responsive Fluorescent PNA Analogue as a Tool for Detecting G-quadruplex Motifs of Oncogenes and Activity of Toxic Ribosome-Inactivating Proteins

Sabale, Pramod M., Srivatsan, Seergazhi G.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.64 MB

english, 2016

7

Clickable PNA Probes for Imaging Human Telomeres and Poly(A) RNAs

Sabale, Pramod M., Ambi, Uddhav B., Srivatsan, Seergazhi G.

Journal:

Year:

2018

Language:

english

File:

PDF, 4.42 MB

english, 2018

8

Synthesis of DNA and RNA Oligonucleotides Containing a DualâPurpose SeleniumâModified Fluorescent Nucleoside Probe

Nuthanakanti, Ashok, Srivatsan, Seergazhi G.

Journal:

Current Protocols in Nucleic Acid Chemistry

Year:

2020

File:

PDF, 769 KB

2020

9

Lucifer-Based Environment-Sensitive Fluorescent PNA Probe for Imaging Poly(A) RNAs

Srivatsan, Seergazhi G, Sabale, Pramod M, Ambi, Uddhav B

Journal:

Year:

2018

Language:

english

File:

PDF, 1.61 MB

english, 2018

10

Probing the competition between duplex and G-quadruplex/i-motif structures using a conformation-sensitive fluorescent nucleoside probe

Sabale, Pramod M., Tanpure, Arun A., Srivatsan, Seergazhi G.

Journal:

Organic & Biomolecular Chemistry

Year:

2018

Language:

english

File:

PDF, 2.18 MB

english, 2018

11

A dual-app nucleoside probe reports G-quadruplex formation and ligand binding in the long terminal repeat of HIV-1 proviral genome

Sontakke, Vyankat A., Srivatsan, Seergazhi G.

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2020

File:

PDF, 951 KB

2020

12

Synthesis and enzymatic incorporation of a fluorescent pyrimidine ribonucleotide

Srivatsan, Seergazhi G, Tor, Yitzhak

Journal:

Nature Protocols

Year:

2007

Language:

english

File:

PDF, 247 KB

english, 2007

13

Enzymatic Incorporation of Emissive Pyrimidine Ribonucleotides

Seergazhi G. Srivatsan, Yitzhak Tor

Journal:

Chemistry – An Asian Journal

Year:

2009

Language:

english

File:

PDF, 431 KB

english, 2009

14

Posttranscriptional chemical labeling of RNA by using bioorthogonal chemistry

George, Jerrin Thomas, Srivatsan, Seergazhi G.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.99 MB

english, 2017

15

A Ribozyme for the Aldol Reaction

Stefan Fusz, Alexander Eisenführ, Seergazhi G. Srivatsan, Alexander Heckel, Michael Famulok

Journal:

Chemistry & Biology

Year:

2005

Language:

english

File:

PDF, 485 KB

english, 2005

16

Photocleavable Initiator Nucleotide Substrates for an Aldolase Ribozyme

Fusz, Stefan, Srivatsan, Seergazhi G., Ackermann, Damian, Famulok, Michael

Journal:

Journal of Organic Chemistry

Year:

2008

Language:

english

File:

PDF, 760 KB

english, 2008

17

A Lucifer-Based Environment-Sensitive Fluorescent PNA Probe for Imaging Poly(A) RNAs

Sabale, Pramod M., Ambi, Uddhav B., Srivatsan, Seergazhi G.

Journal:

Year:

2018

File:

PDF, 645 KB

2018

18

Self-Assemblies of Nucleolipid Supramolecular Synthons Show Unique Self-Sorting and Cooperative Assembling Process

Nuthanakanti, Ashok, Walunj, Manisha B, Torris, Arun, Badiger, Manohar V, Srivatsan, Seergazhi G

Journal:

Year:

2019

Language:

english

File:

PDF, 2.43 MB

english, 2019

19

Synthesis, Photophysical Characterization, and Enzymatic Incorporation of a Microenvironment-Sensitive Fluorescent Uridine Analog

Pawar, Maroti G., Srivatsan, Seergazhi G.

Journal:

Organic Letters

Year:

2011

Language:

english

File:

PDF, 1.18 MB

english, 2011

20

Fluorescent Pyrimidine Ribonucleotide: Synthesis, Enzymatic Incorporation, and Utilization

Srivatsan, Seergazhi G., Tor, Yitzhak

Journal:

Journal of the American Chemical Society

Year:

2007

Language:

english

File:

PDF, 405 KB

english, 2007

21

Cover Feature: A Lucifer-Based Environment-Sensitive Fluorescent PNA Probe for Imaging Poly(A) RNAs (ChemBioChem 8/2018)

Sabale, Pramod M., Ambi, Uddhav B., Srivatsan, Seergazhi G.

Journal:

Year:

2018

File:

PDF, 847 KB

2018

22

Enzymatic incorporation of an azide-modified UTP analog into oligoribonucleotides for post-transcriptional chemical functionalization

Rao, Harita, Tanpure, Arun A, Sawant, Anupam A, Srivatsan, Seergazhi G

Journal:

Nature Protocols

Year:

2012

Language:

english

File:

PDF, 1.02 MB

english, 2012

23

Synthesis, Photophysical Properties and Incorporation of a Highly Emissive and Environment-Sensitive Uridine Analogue Based on the Lucifer Chromophore

Tanpure, Arun A., Srivatsan, Seergazhi G.

Journal:

Year:

2014

Language:

english

File:

PDF, 599 KB

english, 2014

24

Heavy Atom Containing Fluorescent Ribonucleoside Analog Probe for the Fluorescence Detection of RNA-Ligand Binding

Pawar, Maroti G., Nuthanakanti, Ashok, Srivatsan, Seergazhi G.

Journal:

Bioconjugate Chemistry

Year:

2013

Language:

english

File:

PDF, 2.00 MB

english, 2013

25

Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe

Nuthanakanti, Ashok, Ahmed, Ishtiyaq, Khatik, Saddam Y, Saikrishnan, Kayarat, Srivatsan, Seergazhi G

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 61 KB

english, 2019

26

Multi-stimuli responsive heterotypic hydrogels based on nucleolipids show selective dye adsorption

Nuthanakanti, Ashok, Srivatsan, Seergazhi G.

Journal:

Nanoscale Advances

Year:

2020

File:

PDF, 1.08 MB

2020

27

A Highly Emissive Fluorescent Nucleoside that Signals the Activity of Toxic Ribosome-Inactivating Proteins

Seergazhi G. Srivatsan, Nicholas J. Greco, Yitzhak Tor

Journal:

Angewandte Chemie

Year:

2008

Language:

english

File:

PDF, 545 KB

english, 2008

28

Using an emissive uridine analogue for assembling fluorescent HIV-1 TAR constructs

Seergazhi G. Srivatsan, Yitzhak Tor

Journal:

Year:

2007

Language:

english

File:

PDF, 546 KB

english, 2007

29

Hierarchical Self-Assembly of Switchable Nucleolipid Supramolecular Gels Based on Environment-Sensitive Fluorescent Nucleoside Analogs

Srivatsan, Seergazhi G, Nuthanakanti, Ashok

Journal:

Year:

2016

Language:

english

File:

PDF, 1.28 MB

english, 2016

30

A versatile toolbox for posttranscriptional chemical labeling and imaging of RNA

Sawant, Anupam A., Tanpure, Arun A., Mukherjee, Progya P., Athavale, Soumitra, Kelkar, Ashwin, Galande, Sanjeev, Srivatsan, Seergazhi G.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 3.71 MB

english, 2016

31

Designing new isomorphic fluorescent nucleobase analogues: the thieno[3,2-d]pyrimidine core

Yitzhak Tor, Susan Del Valle, David Jaramillo, Seergazhi G. Srivatsan, Andro Rios, Haim Weizman

Journal:

Year:

2007

Language:

english

File:

PDF, 496 KB

english, 2007

32

Inhibition of cytohesins by SecinH3 leads to hepatic insulin resistance

Hafner, Markus, Schmitz, Anton, Grüne, Imke, Srivatsan, Seergazhi G., Paul, Bianca, Kolanus, Waldemar, Quast, Thomas, Kremmer, Elisabeth, Bauer, Inga, Famulok, Michael

Journal:

Year:

2006

Language:

english

File:

PDF, 259 KB

english, 2006

33

Fluorescent Nucleoside Analogs: Probes for Investigating Nucleic Acid Structure and Function

Tanpure, Arun A., Pawar, Maroti G., Srivatsan, Seergazhi G.

Journal:

Israel Journal of Chemistry

Year:

2013

Language:

english

File:

PDF, 800 KB

english, 2013

34

Conformation-sensitive nucleoside analogues as topology-specific fluorescence turn-on probes for DNA and RNA G-quadruplexes

Tanpure, Arun A., Srivatsan, Seergazhi G.

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 3.08 MB

english, 2015

35

Fluorescence-based tools to probe G-quadruplexes in cell-free and cellular environments

Manna, Sudeshna, Srivatsan, Seergazhi G.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.04 MB

english, 2018

36

A Microenvironment-Sensitive Fluorescent Pyrimidine Ribonucleoside Analogue: Synthesis, Enzymatic Incorporation, and Fluorescence Detection of a DNA Abasic Site

Arun A. Tanpure, Dr. Seergazhi G. Srivatsan

Journal:

Chemistry - A European Journal

Year:

2011

Language:

english

File:

PDF, 541 KB

english, 2011

37

Titelbild: A Highly Emissive Fluorescent Nucleoside that Signals the Activity of Toxic Ribosome-Inactivating Proteins (Angew. Chem. 35/2008)

Seergazhi G. Srivatsan, Nicholas J. Greco, Yitzhak Tor

Journal:

Angewandte Chemie

Year:

2008

Language:

german

File:

PDF, 1.18 MB

german, 2008

38

A Highly Emissive Fluorescent Nucleoside that Signals the Activity of Toxic Ribosome-Inactivating Proteins

Seergazhi G. Srivatsan, Nicholas J. Greco, Yitzhak Tor

Journal:

Angewandte Chemie International Edition

Year:

2008

Language:

english

File:

PDF, 545 KB

english, 2008

39

Structure of the Ribosomal RNA Decoding Site Containing a Selenium-Modified Responsive Fluorescent Ribonucleoside Probe

Nuthanakanti, Ashok, Boerneke, Mark A., Hermann, Thomas, Srivatsan, Seergazhi G.

Journal:

Angewandte Chemie

Year:

2017

Language:

english

File:

PDF, 2.20 MB

english, 2017

40

Environment-Responsive Fluorescent Nucleoside Analogue Probe for Studying Oligonucleotide Dynamics in a Model Cell-like Compartment

Pawar, Maroti G., Srivatsan, Seergazhi G.

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 1.14 MB

english, 2013

41

Fluorescent ribonucleoside analogues as probes for investigating RNA structure and function

Srivatsan, Seergazhi G., Sawant, Anupam A.

Journal:

Pure & Applied Chemistry

Year:

2010

Language:

english

File:

PDF, 361 KB

english, 2010

42

Surface-Tuned and Metal-Ion-Responsive Supramolecular Gels Based on Nucleolipids

Nuthanakanti, Ashok, Srivatsan, Seergazhi G.

Journal:

ACS Applied Materials & Interfaces

Year:

2017

Language:

english

File:

PDF, 2.21 MB

english, 2017

43

Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe

Nuthanakanti, Ashok, Ahmed, Ishtiyaq, Khatik, Saddam Y, Kayarat, Saikrishnan, Srivatsan, Seergazhi G

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 7.05 MB

english, 2019

44

Responsive fluorescent nucleotides serve as efficient substrates to probe terminal uridylyl transferase

George, Jerrin Thomas, Srivatsan, Seergazhi G

Journal:

Chemical Communications

Year:

2020

File:

PDF, 1.83 MB

2020

45

Bioorthogonal chemistry-based RNA labeling technologies: evolution and current state

George, Jerrin Thomas, Srivatsan, Seergazhi G

Journal:

Chemical Communications

Year:

2020

File:

PDF, 1.95 MB

2020

46

A highly fluorescent nucleoside analog based on thieno[3,4-d]pyrimidine senses mismatched pairing

Srivatsan, Seergazhi G., Weizman, Haim, Tor, Yitzhak

Journal:

Organic & Biomolecular Chemistry

Year:

2008

Language:

english

File:

PDF, 210 KB

english, 2008

47

Synthesis and Photophysical Characterisation of a Fluorescent Nucleoside Analogue that Signals the Presence of an Abasic Site in RNA

Tanpure, Arun A., Srivatsan, Seergazhi G.

Journal:

Year:

2012

Language:

english

File:

PDF, 787 KB

english, 2012

48

A base-modified PNA–graphene oxide platform as a turn-on fluorescence sensor for the detection of human telomeric repeats

Sabale, Pramod M., George, Jerrin Thomas, Srivatsan, Seergazhi G.

Journal:

Year:

2014

Language:

english

File:

PDF, 2.24 MB

english, 2014

49

Cover Picture: A Highly Emissive Fluorescent Nucleoside that Signals the Activity of Toxic Ribosome-Inactivating Proteins (Angew. Chem. Int. Ed. 35/2008)

Seergazhi G. Srivatsan, Nicholas J. Greco, Yitzhak Tor

Journal:

Angewandte Chemie International Edition

Year:

2008

Language:

english

File:

PDF, 2.39 MB

english, 2008

50

Functional Nucleic Acids in High Throughput Screening and Drug Discovery

Srivatsan, Seergazhi, Famulok, Michael

Journal:

Combinatorial Chemistry & High Throughput Screening

Year:

2007

Language:

english

File:

PDF, 258 KB

english, 2007

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